參考了幾篇文章，基本都是壓縮單個檔案或者一個資料夾，不能混合壓縮。
找了一個不需要額外jar包的程式碼上改的。(參考文章)

不需要額外jar包。

壓縮方法:

import java.io.File;
import java.io.FileInputStream;
import java.io.FileOutputStream;
import java.io.IOException;
import java.io.OutputStream;
import java.util.ArrayList;
import java.util.List;
import java.util.zip.ZipEntry;
import
 
 java.util.zip.ZipOutputStream;

public class ZipUtil {

    private static final int BUFFER_SIZE = 2 * 1024;

    /**
     * @param srcDir 壓縮資料夾路徑
     * @param out 壓縮檔案輸出流
     * @param KeepDirStructure 是否保留原來的目錄結構,
     *          true:保留目錄結構;
     *          false:所有檔案跑到壓縮包根目錄下(注意：不保留目錄結構可能會出現同名檔案,會壓縮失敗)
     * @throws
 
 RuntimeException 壓縮失敗會丟擲執行時異常
     */
    public static void toZip(String[] srcDir, String outDir,
            boolean KeepDirStructure) throws RuntimeException, Exception {

        OutputStream out = new FileOutputStream(new File(outDir));

        long start = System.currentTimeMillis();
        ZipOutputStream zos = null
 
;
        try {
            zos = new ZipOutputStream(out);
            List<File> sourceFileList = new ArrayList<File>();
            for (String dir : srcDir) {
                File sourceFile = new File(dir);
                sourceFileList.add(sourceFile);
            }
            compress(sourceFileList, zos, KeepDirStructure);
            long end = System.currentTimeMillis();
            System.out.println("壓縮完成，耗時：" + (end - start) + " ms");
        } catch (Exception e) {
            throw new RuntimeException("zip error from ZipUtils", e);
        } finally {
            if (zos != null) {
                try {
                    zos.close();
                } catch (IOException e) {
                    e.printStackTrace();
                }
            }
        }

    }

    /**
     * 遞迴壓縮方法
     * @param sourceFile 原始檔
     * @param zos zip輸出流
     * @param name 壓縮後的名稱
     * @param KeepDirStructure 是否保留原來的目錄結構,
     *          true:保留目錄結構;
     *          false:所有檔案跑到壓縮包根目錄下(注意：不保留目錄結構可能會出現同名檔案,會壓縮失敗)
     * @throws Exception
     */
    private static void compress(File sourceFile, ZipOutputStream zos,
            String name, boolean KeepDirStructure) throws Exception {
        byte[] buf = new byte[BUFFER_SIZE];
        if (sourceFile.isFile()) {
            zos.putNextEntry(new ZipEntry(name));
            int len;
            FileInputStream in = new FileInputStream(sourceFile);
            while ((len = in.read(buf)) != -1) {
                zos.write(buf, 0, len);
            }
            // Complete the entry
            zos.closeEntry();
            in.close();
        } else {
            File[] listFiles = sourceFile.listFiles();
            if (listFiles == null || listFiles.length == 0) {
                if (KeepDirStructure) {
                    zos.putNextEntry(new ZipEntry(name + "/"));
                    zos.closeEntry();
                }

            } else {
                for (File file : listFiles) {
                    if (KeepDirStructure) {
                        compress(file, zos, name + "/" + file.getName(),
                                KeepDirStructure);
                    } else {
                        compress(file, zos, file.getName(), KeepDirStructure);
                    }

                }
            }
        }
    }

    private static void compress(List<File> sourceFileList,
            ZipOutputStream zos, boolean KeepDirStructure) throws Exception {
        byte[] buf = new byte[BUFFER_SIZE];
        for (File sourceFile : sourceFileList) {
            String name = sourceFile.getName();
            if (sourceFile.isFile()) {
                zos.putNextEntry(new ZipEntry(name));
                int len;
                FileInputStream in = new FileInputStream(sourceFile);
                while ((len = in.read(buf)) != -1) {
                    zos.write(buf, 0, len);
                }
                zos.closeEntry();
                in.close();
            } else {
                File[] listFiles = sourceFile.listFiles();
                if (listFiles == null || listFiles.length == 0) {
                    if (KeepDirStructure) {
                        zos.putNextEntry(new ZipEntry(name + "/"));
                        zos.closeEntry();
                    }

                } else {
                    for (File file : listFiles) {
                        if (KeepDirStructure) {
                            compress(file, zos, name + "/" + file.getName(),
                                    KeepDirStructure);
                        } else {
                            compress(file, zos, file.getName(),
                                    KeepDirStructure);
                        }

                    }
                }
            }
        }
    }

    public static void main(String[] args) throws Exception {

        String[] srcDir = { "C:\\Users\\LiuHY\\Desktop\\java",
                "C:\\Users\\LiuHY\\Desktop\\java2",
                "C:\\Users\\LiuHY\\Desktop\\fortest.txt" };
        String outDir = "C:\\Users\\LiuHY\\Desktop\\aaa.zip";
        ZipUtil.toZip(srcDir, outDir, true);
    }
}

解壓

/**
   *
   * @Description (解壓)
   * @param zipPath zip路徑
   * @param charset 編碼
   * @param outPutPath 輸出路徑
   */
public static void decompression(String zipPath, String charset, String outPutPath) {
       long startTime=System.currentTimeMillis();  
       try {  
           ZipInputStream Zin=new ZipInputStream(new FileInputStream(zipPath), Charset.forName(charset));//輸入源zip路徑  
           BufferedInputStream Bin=new BufferedInputStream(Zin);  
           String Parent = outPutPath; //輸出路徑（資料夾目錄）  
           File Fout=null;  
           ZipEntry entry;  
           try {  
               while((entry = Zin.getNextEntry())!=null && !entry.isDirectory()){  
                   Fout=new File(Parent,entry.getName());  
                   if(!Fout.exists()){  
                       (new File(Fout.getParent())).mkdirs();  
                   }  
                   FileOutputStream out=new FileOutputStream(Fout);  
                   BufferedOutputStream Bout=new BufferedOutputStream(out);  
                   int b;  
                   while((b=Bin.read())!=-1){  
                       Bout.write(b);  
                   }  
                   Bout.close();  
                   out.close();  
                   System.out.println(Fout+"解壓成功");      
               }  
               Bin.close();  
               Zin.close();  
           } catch (IOException e) {  
               // TODO Auto-generated catch block  
               e.printStackTrace();  
           }  
       } catch (FileNotFoundException e) {  
           // TODO Auto-generated catch block  
           e.printStackTrace();  
       }  
       long endTime=System.currentTimeMillis();  
       System.out.println("耗費時間： "+(endTime-startTime)+" ms");
   }